放線菌綱
放線菌綱(ほうせんきんこう、Actinomycetes)とは真正細菌の放線菌門における綱の一つである。
放線菌綱 | |||||||||
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分類 | |||||||||
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学名 | |||||||||
Actinomycetes Krassilnikov et al., 1949[1] (IJSEMリストに記載 1980[2]) | |||||||||
タイプ属 | |||||||||
アクチノマイセス属 Actinomyces Harz 1877[3] (IJSEMリストに記載 1980[2]) | |||||||||
シノニム | |||||||||
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下位分類(目)[4] | |||||||||
本文を参照 |
現在の分類表はList of Prokaryotic names with Standing in Nomenclature (LPSN)[5]及びアメリカ国立生物工学情報センター(NCBI)の決定に基づいている[6]。
- アシドサーマス目(Acidothermales)
Sen et al. 2014[7](IJSEMリストに記載 2015[8]) - 放線菌目(Actinomycetales)
Buchanan 1917[9](IJSEMリストに記載 1980[2]) - ビフィドバクテリウム目(Bifidobacteriales)
Stackebrandt et al. 1997[10](IJSEMリストに記載 1980[11]) - カテヌリスポラ目(Catenulisporales)
Donadio et al. 2012[12](IJSEMリストに記載 2015[13]) - クリプトスポランジウム目(Cryptosporangiales)
Nouioui et al. 2018[14](IJSEMリストに記載 2018[15]) - フランキア目(Frankiales)
Sen et al. 2014[7](IJSEMリストに記載 2015[8]) - ゲオデルマトフィラス目(Geodermatophilales)
Sen et al. 2014[7](IJSEMリストに記載 2015[8]) - グライコマイセス目(Glycomycetales)
Labeda 2012[16](IJSEMリストに記載 2015[13]) - Jatrophihabitantales
Salam et al. 2020[17](IJSEMリストに記載 2020[18]) - ジアンゲラ目(Jiangellales)
Tang et al. 2012[19](IJSEMリストに記載 2015[13]) - キネオスポリア目(Kineosporiales)
Kämpfer 2012[20](IJSEMリストに記載 2015[13]) - マイクロコッカス目(Micrococcales)
Prévot 1940[21](IJSEMリストに記載 1980[2]) - ミクロモノスポラ目(Micromonosporales)
Genilloud 2012[22](IJSEMリストに記載 2015[13]) - マイコバクテリウム目(Mycobacteriales)
Janke 1924[23](IJSEMリストに記載 1980[2]) - ナカムレラ目(Nakamurellales)
Sen et al. 2014[7](IJSEMリストに記載 2015[8]) - プロピオニバクテリウム目(Propionibacteriales)
Rainey et al. 1997[10](Patrick and McDowell 2012[24])(IJSEMリストに記載 2015[13]) - シュードノカルディア目(Pseudonocardiales)
Labeda and Goodfellow 2012[25](IJSEMリストに記載 2015[13]) - スポリティヤ目(Sporichthyales)
Nouioui et al. 2018[14](IJSEMリストに記載 2018[15]) - ストレプトスポランジウム目(Streptosporangiales)
Goodfellow 2012[26](IJSEMリストに記載 2015[13])
系統樹
編集
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Genome Taxonomy DatabaseによるGTDB 07-RS207[31][32][33]
編集脚注
編集- ^ Krassilnikov NA (1949). “Opredelitelv Bakterii i Actinomicetov”. Akademii Nauk SSSR(モスクワ).
- ^ a b c d e V. B. D. Skerman, Vicki. McGOWAN1, P. H. A. Sneath (01 January 1980). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology 30 (1). doi:10.1099/00207713-30-1-225.
- ^ Harz CO (1877-1878). “Actinomyces bovis, ein neuer Schimmel in den Geweben des Rindes”. Deutsche Zeitschrift für Thiermedizin 5: 125-140.
- ^ “Class Actinomycetes”. List of Prokaryotic names with Standing in Nomenclature. 2023年1月14日閲覧。
- ^ “Actinobacteria”. List of Prokaryotic names with Standing in Nomenclature(LPSN). June 7, 2021閲覧。
- ^ Sayers. “Actinomycetia”. National Center for Biotechnology Information (NCBI) taxonomy database. 2021年3月20日閲覧。
- ^ a b c d Arnab Sen, Vincent Daubin, Danis Abrouk, Isaac Gifford, Alison M. Berry, Philippe Normand (01 November 2014). “Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders ‘Frankiales’ and Micrococcales should be split into coherent entities: proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov.”. International Journal of Systematic and Evolutionary Microbiology 64 (Pt_11). doi:10.1099/ijs.0.063966-0. PMID 25168610.
- ^ a b c d Aharon Oren, George M. Garrity (01 February 2015). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 64, part 11, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_2). doi:10.1099/ijs.0.000017.
- ^ R. E. Buchanan (1 March 1917). “STUDIES IN THE NOMENCLATURE AND CLASSIFICATION OF THE BACTERIA II. THE PRIMARY SUBDIVISIONS OF THE SCHIZOMYCETES”. Journal of Bacteriology 2 (2): 155-64. doi:10.1128/jb.2.2.155-164.1917. PMC 378699. PMID 16558735 .
- ^ a b Erko Stackebrandt, Fred A. Rainey, Naomi L. Ward-Rainey (01 January 1997). “Proposal for a New Hierarchic Classification System, Actinobacteria classis nov.”. International Journal of Systematic and Evolutionary Microbiology 47 (2). doi:10.1099/00207713-47-2-479.
- ^ “Notification that New Names and New Combinations Have Appeared in Volume 47, No. 2, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 47 (3). (01 July 1997). doi:10.1099/00207713-47-3-917.
- ^ Donadio S, Cavaletti L, Monciardini P (09 May 2012). “Order IV. Catenulisporales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 225. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ a b c d e f g h Aharon Oren, George M. Garrity (01 July 2015). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 65 (Pt_7). doi:10.1099/ijs.0.000317.
- ^ a b Imen Nouioui, Lorena Carro, Marina García-López, Jan P Meier-Kolthoff, Tanja Woyke, Nikos C Kyrpides, Rüdiger Pukall, Hans-Peter Klenk, Michael Goodfellow, Markus Göker (22 August 2018). “Genome-Based Taxonomic Classification of the Phylum Actinobacteria”. Frontiers in Microbiology 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281 .
- ^ a b Aharon Oren, George M. Garrity (23 October 2018). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 68 (11). doi:10.1099/ijsem.0.003071.
- ^ Labeda DP. (09 May 2012). “Order VII. Glycomycetales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 546. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Nimaichand Salam, Jian-Yu Jiao, Xiao-Tong Zhang, Wen-Jun Li (06 December 2019). “Update on the classification of higher ranks in the phylum Actinobacteria”. International Journal of Systematic and Evolutionary Microbiology 70 (2). doi:10.1099/ijsem.0.003920. PMID 31808738.
- ^ Aharon Oren, George M. Garrity (29 May 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 2 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (5). doi:10.1099/ijsem.0.004148.
- ^ Tang SK, Zhi X-Y, Li W-J (09 May 2012). “Order VIII. Jiangellales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 225. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Kämpfer P (09 May 2012). “Order IX. Kineosporiales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 225. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Prévot AR. (1940). Manuel de classification et de determination des bacteries anaerobies (1st ed.). Masson (Paris)
- ^ Genilloud O (09 May 2012). “Order XI Micromonosporales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 1035. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Janke A. Allgemeine technische Mikrobiologie. I. Teil. Die Mikroorganismen. T. Steinkopf, Dresden und Leipzig, 1924
- ^ Patrick S, McDowell A (09 May 2012). “Order XII. Propionibacteriales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 1137. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Labeda DP, Goodfellow M (09 May 2012). “Order XIII. Pseudonocardiales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 1137. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Goodfellow M (09 May 2012). “Order XV. Streptosporangiales ord. nov.”. In Michael Goodfellow, Peter Kämpfer, Hans-Jürgen Busse, Martha E. Trujillo, Ken-ichiro Suzuki, Wolfgang Ludwig, William B. Whitman. Bergey's Manual of Systematic Bacteriology Volume 5: The Actinobacteria (2 ed.). Springer (New York). p. 1805. doi:10.1007/978-0-387-68233-4. ISBN 978-1-4939-7916-5
- ^ Imen Nouioui, Lorena Carro, Marina García-López, Jan P Meier-Kolthoff, Tanja Woyke, Nikos C Kyrpides, Rüdiger Pukall, Hans-Peter Klenk, Michael Goodfellow, Markus Göker (22 August 2018). “Genome-Based Taxonomic Classification of the Phylum Actinobacteria”. Frontiers in Microbiology 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281 .
- ^ “The LTP”. 23 February 2021閲覧。
- ^ “LTP_all tree in newick format”. 23 February 2021閲覧。
- ^ “LTP_12_2021 Release Notes”. 23 February 2021閲覧。
- ^ “GTDB release 07-RS207”. Genome Taxonomy Database. 20 June 2022閲覧。
- ^ “ar53_r207.sp_label”. Genome Taxonomy Database. 20 June 2022閲覧。
- ^ “Taxon History”. Genome Taxonomy Database. 20 June 2022閲覧。